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DYNC1I2 dynein cytoplasmic 1 intermediate chain 2 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100597127, updated on 8-Mar-2024

Summary

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Gene symbol
DYNC1I2
Gene description
dynein cytoplasmic 1 intermediate chain 2
See related
EnsemblRapid:ENSNLEG00000005419
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See DYNC1I2 in Genome Data Viewer
Location:
chromosome: 22a
Exon count:
19
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 22a NC_044402.1 (72019874..72082318)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 22a NC_019837.1 (61530348..61596428)

Chromosome 22a - NC_044402.1Genomic Context describing neighboring genes Neighboring gene cytochrome b reductase 1 Neighboring gene 60S ribosomal protein L12 pseudogene Neighboring gene solute carrier family 25 member 12 Neighboring gene U6 spliceosomal RNA Neighboring gene histone acetyltransferase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dynein heavy chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables dynein light chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transport along microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytoplasmic dynein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytoplasmic dynein 1 intermediate chain 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044402.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    72019874..72082318
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012500198.2 → XP_012355652.1  cytoplasmic dynein 1 intermediate chain 2 isoform X9

    UniProtKB/TrEMBL
    A0A2I3GGY1, G1R0A6
    Conserved Domains (3) summary
    COG2319
    Location:303 → 573
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:313 → 351
    7WD40; WD40 repeat [structural motif]
    pfam11540
    Location:109 → 137
    Dynein_IC2; Cytoplasmic dynein 1 intermediate chain 2

  2. XM_004091969.3 → XP_004092017.1  cytoplasmic dynein 1 intermediate chain 2 isoform X8

    See identical proteins and their annotated locations for XP_004092017.1

    UniProtKB/TrEMBL
    G1R0A6
    Conserved Domains (3) summary
    COG2319
    Location:303 → 573
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:313 → 351
    7WD40; WD40 repeat [structural motif]
    pfam11540
    Location:109 → 137
    Dynein_IC2; Cytoplasmic dynein 1 intermediate chain 2

  3. XM_003253703.4 → XP_003253751.1  cytoplasmic dynein 1 intermediate chain 2 isoform X3

    See identical proteins and their annotated locations for XP_003253751.1

    UniProtKB/TrEMBL
    A0A2I3FRB4, G1R0A6
    Related
    ENSNLEP00000024672.1, ENSNLET00000039876.2
    Conserved Domains (3) summary
    COG2319
    Location:329 → 599
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:339 → 377
    7WD40; WD40 repeat [structural motif]
    pfam11540
    Location:135 → 163
    Dynein_IC2; Cytoplasmic dynein 1 intermediate chain 2

  4. XM_003253704.4 → XP_003253752.1  cytoplasmic dynein 1 intermediate chain 2 isoform X6

    See identical proteins and their annotated locations for XP_003253752.1

    UniProtKB/TrEMBL
    G1R0A6
    Conserved Domains (3) summary
    COG2319
    Location:321 → 591
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:331 → 369
    7WD40; WD40 repeat [structural motif]
    pfam11540
    Location:127 → 155
    Dynein_IC2; Cytoplasmic dynein 1 intermediate chain 2

  5. XM_030802876.1 → XP_030658736.1  cytoplasmic dynein 1 intermediate chain 2 isoform X5

    UniProtKB/TrEMBL
    G1R0A6
    Conserved Domains (3) summary
    COG2319
    Location:323 → 593
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:333 → 371
    7WD40; WD40 repeat [structural motif]
    pfam11540
    Location:129 → 157
    Dynein_IC2; Cytoplasmic dynein 1 intermediate chain 2

  6. XM_030802872.1 → XP_030658732.1  cytoplasmic dynein 1 intermediate chain 2 isoform X1

    UniProtKB/TrEMBL
    G1R0A6
    Conserved Domains (3) summary
    COG2319
    Location:341 → 611
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:351 → 389
    7WD40; WD40 repeat [structural motif]
    pfam11540
    Location:147 → 175
    Dynein_IC2; Cytoplasmic dynein 1 intermediate chain 2

  7. XM_030802878.1 → XP_030658738.1  cytoplasmic dynein 1 intermediate chain 2 isoform X9

    UniProtKB/TrEMBL
    A0A2I3GGY1, G1R0A6
    Conserved Domains (3) summary
    COG2319
    Location:303 → 573
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:313 → 351
    7WD40; WD40 repeat [structural motif]
    pfam11540
    Location:109 → 137
    Dynein_IC2; Cytoplasmic dynein 1 intermediate chain 2

  8. XM_004091968.3 → XP_004092016.1  cytoplasmic dynein 1 intermediate chain 2 isoform X8

    See identical proteins and their annotated locations for XP_004092016.1

    UniProtKB/TrEMBL
    G1R0A6
    Related
    ENSNLEP00000030532.2, ENSNLET00000048543.2
    Conserved Domains (3) summary
    COG2319
    Location:303 → 573
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:313 → 351
    7WD40; WD40 repeat [structural motif]
    pfam11540
    Location:109 → 137
    Dynein_IC2; Cytoplasmic dynein 1 intermediate chain 2

  9. XM_030802880.1 → XP_030658740.1  cytoplasmic dynein 1 intermediate chain 2 isoform X11

    UniProtKB/TrEMBL
    G1R0A6
    Conserved Domains (3) summary
    COG2319
    Location:321 → 591
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:331 → 369
    7WD40; WD40 repeat [structural motif]
    pfam11540
    Location:127 → 155
    Dynein_IC2; Cytoplasmic dynein 1 intermediate chain 2

  10. XM_003253700.4 → XP_003253748.1  cytoplasmic dynein 1 intermediate chain 2 isoform X6

    See identical proteins and their annotated locations for XP_003253748.1

    UniProtKB/TrEMBL
    G1R0A6
    Conserved Domains (3) summary
    COG2319
    Location:321 → 591
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:331 → 369
    7WD40; WD40 repeat [structural motif]
    pfam11540
    Location:127 → 155
    Dynein_IC2; Cytoplasmic dynein 1 intermediate chain 2

  11. XM_030802879.1 → XP_030658739.1  cytoplasmic dynein 1 intermediate chain 2 isoform X10

    UniProtKB/TrEMBL
    G1R0A6
    Conserved Domains (3) summary
    COG2319
    Location:323 → 593
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:333 → 371
    7WD40; WD40 repeat [structural motif]
    pfam11540
    Location:129 → 157
    Dynein_IC2; Cytoplasmic dynein 1 intermediate chain 2

  12. XM_030802875.1 → XP_030658735.1  cytoplasmic dynein 1 intermediate chain 2 isoform X5

    UniProtKB/TrEMBL
    G1R0A6
    Related
    ENSNLEP00000006627.4, ENSNLET00000006959.4
    Conserved Domains (3) summary
    COG2319
    Location:323 → 593
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:333 → 371
    7WD40; WD40 repeat [structural motif]
    pfam11540
    Location:129 → 157
    Dynein_IC2; Cytoplasmic dynein 1 intermediate chain 2

  13. XM_030802874.1 → XP_030658734.1  cytoplasmic dynein 1 intermediate chain 2 isoform X4

    UniProtKB/TrEMBL
    G1R0A6
    Conserved Domains (3) summary
    COG2319
    Location:329 → 599
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:339 → 377
    7WD40; WD40 repeat [structural motif]
    pfam11540
    Location:135 → 163
    Dynein_IC2; Cytoplasmic dynein 1 intermediate chain 2

  14. XM_030802871.1 → XP_030658731.1  cytoplasmic dynein 1 intermediate chain 2 isoform X1

    UniProtKB/TrEMBL
    G1R0A6
    Conserved Domains (3) summary
    COG2319
    Location:341 → 611
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:351 → 389
    7WD40; WD40 repeat [structural motif]
    pfam11540
    Location:147 → 175
    Dynein_IC2; Cytoplasmic dynein 1 intermediate chain 2

  15. XM_030802873.1 → XP_030658733.1  cytoplasmic dynein 1 intermediate chain 2 isoform X2

    UniProtKB/TrEMBL
    G1R0A6
    Conserved Domains (3) summary
    COG2319
    Location:341 → 611
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:351 → 389
    7WD40; WD40 repeat [structural motif]
    pfam11540
    Location:147 → 175
    Dynein_IC2; Cytoplasmic dynein 1 intermediate chain 2

  16. XM_003253701.4 → XP_003253749.1  cytoplasmic dynein 1 intermediate chain 2 isoform X3

    See identical proteins and their annotated locations for XP_003253749.1

    UniProtKB/TrEMBL
    A0A2I3FRB4, G1R0A6
    Conserved Domains (3) summary
    COG2319
    Location:329 → 599
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:339 → 377
    7WD40; WD40 repeat [structural motif]
    pfam11540
    Location:135 → 163
    Dynein_IC2; Cytoplasmic dynein 1 intermediate chain 2

  17. XM_030802877.1 → XP_030658737.1  cytoplasmic dynein 1 intermediate chain 2 isoform X7

    UniProtKB/TrEMBL
    G1R0A6
    Conserved Domains (3) summary
    COG2319
    Location:309 → 579
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:319 → 357
    7WD40; WD40 repeat [structural motif]
    pfam11540
    Location:115 → 143
    Dynein_IC2; Cytoplasmic dynein 1 intermediate chain 2
Nucleotide Protein
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