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SGCD sarcoglycan delta [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100596761, updated on 8-Mar-2024

Summary

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Gene symbol
SGCD
Gene description
sarcoglycan delta
See related
EnsemblRapid:ENSNLEG00000035018
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See SGCD in Genome Data Viewer
Location:
chromosome: 2
Exon count:
9
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 2 NC_044382.1 (22035052..22462029, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 2 NC_019817.1 (24283681..24722078, complement)

Chromosome 2 - NC_044382.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene PPP1R2 family member B Neighboring gene peptidyl-prolyl cis-trans isomerase G pseudogene Neighboring gene 60S ribosomal protein L6 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044382.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    22035052..22462029 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003268565.3 → XP_003268613.2  delta-sarcoglycan isoform X1

    Conserved Domains (1) summary
    pfam04790
    Location:82 → 336
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  2. XM_003268564.3 → XP_003268612.1  delta-sarcoglycan isoform X2

    UniProtKB/TrEMBL
    A0A2I3G2J7
    Related
    ENSNLEP00000026368.1, ENSNLET00000045539.2
    Conserved Domains (1) summary
    pfam04790
    Location:24 → 278
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein
Heading Accession and Version

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