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EXOSC10 exosome component 10 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100593954, updated on 11-Apr-2024

Summary

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Gene symbol
EXOSC10
Gene description
exosome component 10
See related
EnsemblRapid:ENSNLEG00000009539
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See EXOSC10 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
25
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 24 NC_044404.1 (11882578..11912356, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 24 NC_019839.1 (11104461..11131568, complement)

Chromosome 24 - NC_044404.1Genomic Context describing neighboring genes Neighboring gene TAR DNA binding protein Neighboring gene MBL associated serine protease 2 Neighboring gene spermidine synthase Neighboring gene mechanistic target of rapamycin kinase Neighboring gene uncharacterized LOC115833049 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5'-RNA exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in TRAMP-dependent tRNA surveillance pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in histone mRNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear polyadenylation-dependent CUT catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear polyadenylation-dependent antisense transcript catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear polyadenylation-dependent rRNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear polyadenylation-dependent snRNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear polyadenylation-dependent snoRNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in poly(A)-dependent snoRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear exosome (RNase complex) IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exosome component 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044404.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    11882578..11912356 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030805769.1 → XP_030661629.1  exosome component 10

    UniProtKB/TrEMBL
    G1REK0
    Related
    ENSNLEP00000011650.4, ENSNLET00000012224.4
    Conserved Domains (3) summary
    cd06147
    Location:308 → 498
    Rrp6p_like_exo; DEDDy 3'-5' exonuclease domain of yeast Rrp6p, human polymyositis/scleroderma autoantigen 100kDa, and similar proteins
    smart00341
    Location:527 → 607
    HRDC; Helicase and RNase D C-terminal
    pfam08066
    Location:70 → 157
    PMC2NT; PMC2NT (NUC016) domain
Nucleotide Protein
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