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THUMPD2 THUMP domain containing 2 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100592870, updated on 8-Mar-2024

Summary

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Gene symbol
THUMPD2
Gene description
THUMP domain containing 2
See related
EnsemblRapid:ENSNLEG00000016562
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See THUMPD2 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
11
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 19 NC_044399.1 (47012800..47056340)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 19 NC_019834.1 (50253054..50297295)

Chromosome 19 - NC_044399.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene solute carrier family 8 member A1 Neighboring gene transmembrane protein 178A Neighboring gene uncharacterized LOC105738602

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA (guanine) methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
THUMP domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044399.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    47012800..47056340
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030799986.1 → XP_030655846.1  THUMP domain-containing protein 2 isoform X3

    Conserved Domains (1) summary
    cl17173
    Location:40 → 185
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  2. XM_030799987.1 → XP_030655847.1  THUMP domain-containing protein 2 isoform X3

    Conserved Domains (1) summary
    cl17173
    Location:40 → 185
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  3. XM_030799985.1 → XP_030655845.1  THUMP domain-containing protein 2 isoform X2

  4. XM_003262771.4 → XP_003262819.1  THUMP domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    G1S3L4
    Related
    ENSNLEP00000020102.1, ENSNLET00000021108.3
    Conserved Domains (2) summary
    smart00981
    Location:186 → 264
    THUMP; The THUMP domain is named after after thiouridine synthases, methylases and PSUSs
    cl17173
    Location:274 → 419
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
Heading Accession and Version

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