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B4GALT5 beta-1,4-galactosyltransferase 5 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100592572, updated on 8-Mar-2024

Summary

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Gene symbol
B4GALT5
Gene description
beta-1,4-galactosyltransferase 5
See related
EnsemblRapid:ENSNLEG00000006975
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See B4GALT5 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
9
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 13 NC_044393.1 (14388286..14469704)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 13 NC_019828.1 (15004670..15086660)

Chromosome 13 - NC_044393.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene small nuclear ribonucleoprotein F-like Neighboring gene prostaglandin I2 synthase Neighboring gene potassium voltage-gated channel subfamily B member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycoprotein biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044393.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    14388286..14469704
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003252920.2 → XP_003252968.2  beta-1,4-galactosyltransferase 5

    UniProtKB/TrEMBL
    A0A2I3HEK5, G1R5N0
    Related
    ENSNLEP00000008502.3, ENSNLET00000008904.3
    Conserved Domains (1) summary
    cd00899
    Location:161 → 377
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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