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THUMPD3 THUMP domain containing 3 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100592438, updated on 8-Mar-2024

Summary

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Gene symbol
THUMPD3
Gene description
THUMP domain containing 3
See related
EnsemblRapid:ENSNLEG00000003863
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See THUMPD3 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
10
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 21 NC_044401.1 (55835718..55860119, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 21 NC_019836.1 (58560409..58584976, complement)

Chromosome 21 - NC_044401.1Genomic Context describing neighboring genes Neighboring gene LHFPL tetraspan subfamily member 4 Neighboring gene SET domain containing 5 Neighboring gene uncharacterized LOC101177539 Neighboring gene phosphoglycerate mutase 1-like Neighboring gene uncharacterized LOC115832123

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA (guanine) methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
THUMP domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044401.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    55835718..55860119 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030801814.1 → XP_030657674.1  THUMP domain-containing protein 3

    UniProtKB/TrEMBL
    G1QUT0
    Related
    ENSNLEP00000004700.2, ENSNLET00000004941.4
    Conserved Domains (2) summary
    cd11715
    Location:40 → 286
    THUMP_AdoMetMT; THUMP domain associated with S-adenosylmethionine-dependent methyltransferases
    pfam01170
    Location:293 → 478
    UPF0020; Putative RNA methylase family UPF0020
Nucleotide Protein
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