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ACER3 alkaline ceramidase 3 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100590896, updated on 18-Sep-2024

Summary

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Gene symbol
ACER3
Gene description
alkaline ceramidase 3
See related
EnsemblRapid:ENSNLEG00000034984
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See ACER3 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 15 NC_044395.1 (59718445..59883769, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 15 NC_019830.1 (60526635..60690687, complement)

Chromosome 15 - NC_044395.1Genomic Context describing neighboring genes Neighboring gene calpain 5 Neighboring gene olfactory marker protein Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 Neighboring gene tsukushi, small leucine rich proteoglycan Neighboring gene olfactory guanylyl cyclase GC-D-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ceramide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phytosphingosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkaline ceramidase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044395.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    59718445..59883769 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003254680.4 → XP_003254728.1  alkaline ceramidase 3 isoform X1

    UniProtKB/TrEMBL
    A0A2I3HTE2, A0A2I3HV55
    Related
    ENSNLEP00000047484.1, ENSNLET00000039492.2
    Conserved Domains (1) summary
    pfam05875
    Location:9 → 259
    Ceramidase

  2. XM_030829388.1 → XP_030685248.1  alkaline ceramidase 3 isoform X2

    Conserved Domains (1) summary
    pfam05875
    Location:1 → 164
    Ceramidase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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