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POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100590586, updated on 8-Mar-2024

Summary

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Gene symbol
POMGNT1
Gene description
protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)
See related
EnsemblRapid:ENSNLEG00000016590
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See POMGNT1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
23
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 12 NC_044392.1 (15057136..15067230, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 12 NC_019827.1 (15433644..15463510, complement)

Chromosome 12 - NC_044392.1Genomic Context describing neighboring genes Neighboring gene phosphoinositide-3-kinase regulatory subunit 3 Neighboring gene cytochrome c oxidase subunit 7B, mitochondrial-like Neighboring gene tetraspanin 1 Neighboring gene PIK3R3 upstream open reading frame Neighboring gene leucine rich adaptor protein 1 Neighboring gene RAD54 like Neighboring gene leucine rich repeat containing 41

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1
Names
protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044392.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    15057136..15067230 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030823833.1 → XP_030679693.1  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    G1S3T4
    Related
    ENSNLEP00000020172.1, ENSNLET00000021180.3
    Conserved Domains (2) summary
    cd02514
    Location:301 → 623
    GT13_GLCNAC-TI; GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides
    cd13937
    Location:99 → 246
    PANDER_GnT-1_2_like; PANDER-like domain of N-acetylglucosaminyltransferases

  2. XM_012511301.2 → XP_012366755.1  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A2I3GAW0, A0A2I3GF52
    Related
    ENSNLEP00000029903.1, ENSNLET00000049603.2
    Conserved Domains (2) summary
    cd02514
    Location:301 → 628
    GT13_GLCNAC-TI; GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides
    cd13937
    Location:99 → 246
    PANDER_GnT-1_2_like; PANDER-like domain of N-acetylglucosaminyltransferases
Nucleotide Protein
Heading Accession and Version

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