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CLEC5A C-type lectin domain containing 5A [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100589404, updated on 8-Mar-2024

Summary

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Gene symbol
CLEC5A
Gene description
C-type lectin domain containing 5A
See related
EnsemblRapid:ENSNLEG00000002394
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See CLEC5A in Genome Data Viewer
Location:
chromosome: 13
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 13 NC_044393.1 (90914106..90933703, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 13 NC_019828.1 (93310023..93328276, complement)

Chromosome 13 - NC_044393.1Genomic Context describing neighboring genes Neighboring gene putative olfactory receptor 9A1 Neighboring gene olfactory receptor 9A4 Neighboring gene taste 2 receptor member 38 Neighboring gene maltase-glucoamylase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables virus receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 5 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044393.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    90914106..90933703 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003270832.2 → XP_003270880.1  C-type lectin domain family 5 member A isoform X1

    UniProtKB/TrEMBL
    G1QPR2
    Related
    ENSNLEP00000002928.1, ENSNLET00000003077.3
    Conserved Domains (1) summary
    cd03593
    Location:71 → 185
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  2. XM_003270833.3 → XP_003270881.1  C-type lectin domain family 5 member A isoform X3

    UniProtKB/TrEMBL
    A0A2I3GYN8
    Related
    ENSNLEP00000036342.1, ENSNLET00000057954.2
    Conserved Domains (1) summary
    cd03593
    Location:48 → 162
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  3. XM_012512144.1 → XP_012367598.1  C-type lectin domain family 5 member A isoform X2

    Conserved Domains (1) summary
    cd03593
    Location:71 → 184
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
Nucleotide Protein
Heading Accession and Version

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