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TREH trehalase [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100589196, updated on 8-Mar-2024

Summary

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Gene symbol
TREH
Gene description
trehalase
See related
EnsemblRapid:ENSNLEG00000007371
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See TREH in Genome Data Viewer
Location:
chromosome: 15
Exon count:
15
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 15 NC_044395.1 (16121826..16144264)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 15 NC_019830.1 (16490834..16514082)

Chromosome 15 - NC_044395.1Genomic Context describing neighboring genes Neighboring gene DEAD-box helicase 6 Neighboring gene U6 spliceosomal RNA Neighboring gene pleckstrin homology like domain family B member 1 Neighboring gene U6 spliceosomal RNA Neighboring gene archain 1 Neighboring gene 60S ribosomal protein L5-like Neighboring gene transmembrane protein 25 Neighboring gene intraflagellar transport 46

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha,alpha-trehalase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trehalase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044395.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    16121826..16144264
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003253251.3 → XP_003253299.1  trehalase isoform X2

    UniProtKB/TrEMBL
    A0A2I3GQI6
    Related
    ENSNLEP00000033598.1, ENSNLET00000037933.2
    Conserved Domains (1) summary
    pfam01204
    Location:46 → 520
    Trehalase

  2. XM_003253250.4 → XP_003253298.1  trehalase isoform X1

    UniProtKB/TrEMBL
    G1R719
    Related
    ENSNLEP00000008991.1, ENSNLET00000009415.3
    Conserved Domains (1) summary
    pfam01204
    Location:46 → 551
    Trehalase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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