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RTN4R reticulon 4 receptor [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100588816, updated on 8-Mar-2024

Summary

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Gene symbol
RTN4R
Gene description
reticulon 4 receptor
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See RTN4R in Genome Data Viewer
Location:
chromosome: 7b
Exon count:
2
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 7b NC_044387.1 (46099155..46126789)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 7b NC_019822.1 (50008558..50036369)

Chromosome 7b - NC_044387.1Genomic Context describing neighboring genes Neighboring gene proline dehydrogenase 1, mitochondrial-like Neighboring gene DiGeorge syndrome critical region gene 6 like Neighboring gene coiled-coil domain containing 188 Neighboring gene zinc finger DHHC-type palmitoyltransferase 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
reticulon-4 receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044387.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    46099155..46126789
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003280370.4 → XP_003280418.1  reticulon-4 receptor isoform X1

    UniProtKB/TrEMBL
    A0A2I3HU42, G1R140
    Conserved Domains (4) summary
    COG4886
    Location:56 → 249
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:60 → 82
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:156 → 214
    LRR_8; Leucine rich repeat
    cl15307
    Location:260 → 296
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain

  2. XM_030815811.1 → XP_030671671.1  reticulon-4 receptor isoform X2

    UniProtKB/TrEMBL
    A0A2I3HU42
    Conserved Domains (4) summary
    PLN00113
    Location:16 → 194
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    sd00033
    Location:17 → 40
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:90 → 148
    LRR_8; Leucine rich repeat
    cl15307
    Location:194 → 230
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
Nucleotide Protein
Heading Accession and Version

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