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CHKA choline kinase alpha [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100587988, updated on 8-Mar-2024

Summary

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Gene symbol
CHKA
Gene description
choline kinase alpha
See related
EnsemblRapid:ENSNLEG00000006538
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See CHKA in Genome Data Viewer
Location:
chromosome: 4
Exon count:
14
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 4 NC_044384.1 (87348867..87420456, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 4 NC_019819.1 (88190370..88258934, complement)

Chromosome 4 - NC_044384.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase core subunit S8 Neighboring gene T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 Neighboring gene lysine methyltransferase 5B Neighboring gene chromosome 4 C11orf24 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ethanolamine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in CDP-choline pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylethanolamine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
choline kinase alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044384.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    87348867..87420456 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003274028.4 → XP_003274076.3  choline kinase alpha

    UniProtKB/TrEMBL
    G1R435
    Related
    ENSNLEP00000007957.4, ENSNLET00000008340.3
    Conserved Domains (1) summary
    cd05156
    Location:107 → 448
    ChoK_euk; Euykaryotic Choline Kinase

RNA

  1. XR_004029701.1 RNA Sequence

  2. XR_004029702.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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