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MTMR1 myotubularin related protein 1 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100587643, updated on 8-Mar-2024

Summary

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Gene symbol
MTMR1
Gene description
myotubularin related protein 1
See related
EnsemblRapid:ENSNLEG00000013597
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See MTMR1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
18
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) X NC_044406.1 (135854875..135938820)
102 previous assembly Nleu_3.0 (GCF_000146795.2) X NC_019841.1 (136552540..136633972)

Chromosome X - NC_044406.1Genomic Context describing neighboring genes Neighboring gene mastermind like domain containing 1 Neighboring gene myotubularin 1 Neighboring gene uncharacterized LOC115833347 Neighboring gene small nucleolar RNA U3 Neighboring gene CD99 molecule like 2 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myotubularin-related protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044406.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    135854875..135938820
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030807486.1 → XP_030663346.1  myotubularin-related protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A2I3FWX1
    Conserved Domains (2) summary
    cd13358
    Location:143 → 242
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:259 → 585
    Myotub-related; Myotubularin-like phosphatase domain

  2. XM_030807488.1 → XP_030663348.1  myotubularin-related protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A2I3FWX1
    Related
    ENSNLEP00000024391.3, ENSNLET00000032753.3
    Conserved Domains (2) summary
    cd13358
    Location:126 → 225
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:242 → 568
    Myotub-related; Myotubularin-like phosphatase domain

  3. XM_030807487.1 → XP_030663347.1  myotubularin-related protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A2I3FWX1
    Related
    ENSNLEP00000016504.3, ENSNLET00000017350.3
    Conserved Domains (2) summary
    cd13358
    Location:134 → 233
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:250 → 576
    Myotub-related; Myotubularin-like phosphatase domain

  4. XM_030807489.1 → XP_030663349.1  myotubularin-related protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A2I3FWX1
    Conserved Domains (2) summary
    cd13358
    Location:118 → 217
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:234 → 560
    Myotub-related; Myotubularin-like phosphatase domain

  5. XM_012498967.2 → XP_012354421.1  myotubularin-related protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A2I3FWX1
    Related
    ENSNLEP00000025419.2, ENSNLET00000059507.2
    Conserved Domains (2) summary
    cd13358
    Location:126 → 225
    PH-GRAM_MTMR1; Myotubularian related 1 protein (MTMR1) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    pfam06602
    Location:242 → 568
    Myotub-related; Myotubularin-like phosphatase domain
Nucleotide Protein
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