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GPC2 glypican 2 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100587361, updated on 8-Mar-2024

Summary

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Gene symbol
GPC2
Gene description
glypican 2
See related
EnsemblRapid:ENSNLEG00000044073
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See GPC2 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
10
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 17 NC_044397.1 (34845952..34853306, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 17 NC_019832.1 (35296399..35302043, complement)

Chromosome 17 - NC_044397.1Genomic Context describing neighboring genes Neighboring gene trafficking protein particle complex subunit 14 Neighboring gene galactose-3-O-sulfotransferase 4 Neighboring gene STAG3 cohesin complex component Neighboring gene 60S ribosomal protein L29-like Neighboring gene PVR related immunoglobulin domain containing

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein localization to membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in smoothened signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glypican-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044397.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    34845952..34853306 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030796128.1 → XP_030651988.1  glypican-2

    Related
    ENSNLEP00000050052.1, ENSNLET00000075202.1
    Conserved Domains (1) summary
    pfam01153
    Location:29 → 512
    Glypican
Nucleotide Protein
Heading Accession and Version

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