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PMPCA peptidase, mitochondrial processing subunit alpha [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100587136, updated on 8-Mar-2024

Summary

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Gene symbol
PMPCA
Gene description
peptidase, mitochondrial processing subunit alpha
See related
EnsemblRapid:ENSNLEG00000008214
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See PMPCA in Genome Data Viewer
Location:
chromosome: 8
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 8 NC_044388.1 (112242672..112255823)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 8 NC_019823.1 (115591941..115605141)

Chromosome 8 - NC_044388.1Genomic Context describing neighboring genes Neighboring gene caspase recruitment domain family member 9 Neighboring gene DNL-type zinc finger Neighboring gene small nuclear RNA activating complex polypeptide 4 Neighboring gene endosome associated trafficking regulator 1 Neighboring gene uncharacterized LOC115836399 Neighboring gene inositol polyphosphate-5-phosphatase E

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein processing involved in protein targeting to mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial-processing peptidase subunit alpha
Names
peptidase, mitochondrial processing alpha subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044388.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    112242672..112255823
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030818185.1 → XP_030674045.1  mitochondrial-processing peptidase subunit alpha isoform X1

    UniProtKB/TrEMBL
    A0A2I3GVQ2
    Related
    ENSNLEP00000035424.2, ENSNLET00000037622.2
    Conserved Domains (1) summary
    COG0612
    Location:65 → 465
    PqqL; Predicted Zn-dependent peptidase [General function prediction only]

  2. XM_030818186.1 → XP_030674046.1  mitochondrial-processing peptidase subunit alpha isoform X3

    UniProtKB/TrEMBL
    A0A2I3GVQ2
    Conserved Domains (1) summary
    COG0612
    Location:65 → 471
    PqqL; Predicted Zn-dependent peptidase [General function prediction only]

  3. XM_003279782.4 → XP_003279830.1  mitochondrial-processing peptidase subunit alpha isoform X2

    UniProtKB/TrEMBL
    A0A2I3GVQ2, G1RA14
    Related
    ENSNLEP00000010061.1, ENSNLET00000010559.3
    Conserved Domains (1) summary
    COG0612
    Location:65 → 504
    PqqL; Predicted Zn-dependent peptidase [General function prediction only]

  4. XM_030818187.1 → XP_030674047.1  mitochondrial-processing peptidase subunit alpha isoform X4

    UniProtKB/TrEMBL
    A0A2I3H4Y2
    Related
    ENSNLEP00000038718.1, ENSNLET00000043557.2
    Conserved Domains (1) summary
    COG0612
    Location:47 → 404
    PqqL; Predicted Zn-dependent peptidase [General function prediction only]
Nucleotide Protein
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