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LPIN3 lipin 3 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100585975, updated on 8-Mar-2024

Summary

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Gene symbol
LPIN3
Gene description
lipin 3
See related
EnsemblRapid:ENSNLEG00000006489
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See LPIN3 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
20
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 13 NC_044393.1 (22674492..22694191, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 13 NC_019828.1 (23474422..23496289, complement)

Chromosome 13 - NC_044393.1Genomic Context describing neighboring genes Neighboring gene chromodomain helicase DNA binding protein 6 Neighboring gene small nucleolar RNA U3 Neighboring gene elastin microfibril interfacer 3 Neighboring gene zinc fingers and homeoboxes 3 Neighboring gene phospholipase C gamma 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to insulin stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidate phosphatase LPIN3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044393.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    22674492..22694191 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030826548.1 → XP_030682408.1  phosphatidate phosphatase LPIN3 isoform X2

    UniProtKB/TrEMBL
    A0A2I3FW64
    Conserved Domains (3) summary
    pfam04571
    Location:1 → 106
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:596 → 821
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:438 → 528
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  2. XM_030826547.1 → XP_030682407.1  phosphatidate phosphatase LPIN3 isoform X1

    UniProtKB/TrEMBL
    A0A2I3FW64, G1R3X7
    Related
    ENSNLEP00000007899.1, ENSNLET00000008277.3
    Conserved Domains (4) summary
    PRK07764
    Location:156 → 365
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    pfam04571
    Location:1 → 106
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:597 → 822
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:439 → 529
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain
Nucleotide Protein
Heading Accession and Version

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