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SLC35F3 solute carrier family 35 member F3 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100584723, updated on 8-Mar-2024

Summary

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Gene symbol
SLC35F3
Gene description
solute carrier family 35 member F3
See related
EnsemblRapid:ENSNLEG00000031022
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See SLC35F3 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 5 NC_044385.1 (13818154..14248725, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 5 NC_019820.1 (14316287..14667896, complement)

Chromosome 5 - NC_044385.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase assembly factor 6 homolog Neighboring gene 40S ribosomal protein S15 pseudogene Neighboring gene uncharacterized LOC115835131 Neighboring gene potassium two pore domain channel subfamily K member 1 Neighboring gene mitogen-activated protein kinase kinase kinase 21

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in thiamine transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative thiamine transporter SLC35F3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044385.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    13818154..14248725 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003267271.4 → XP_003267319.1  putative thiamine transporter SLC35F3 isoform X1

    UniProtKB/TrEMBL
    A0A2I3G5V8
    Related
    ENSNLEP00000027091.1, ENSNLET00000041567.2
    Conserved Domains (2) summary
    pfam06027
    Location:234 → 407
    SLC35F; Solute carrier family 35
    pfam00892
    Location:137 → 292
    EamA; EamA-like transporter family

  2. XM_030812665.1 → XP_030668525.1  putative thiamine transporter SLC35F3 isoform X2

    Related
    ENSNLEP00000052783.1, ENSNLET00000061741.1
    Conserved Domains (3) summary
    pfam06027
    Location:165 → 338
    SLC35F; Solute carrier family 35
    pfam00892
    Location:68 → 223
    EamA; EamA-like transporter family
    cl38911
    Location:11 → 80
    LGIC_TM; transmembrane domain of Cys-loop neurotransmitter-gated ion channels
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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