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CTSA cathepsin A [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100584301, updated on 8-Mar-2024

Summary

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Gene symbol
CTSA
Gene description
cathepsin A
See related
EnsemblRapid:ENSNLEG00000006799
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See CTSA in Genome Data Viewer
Location:
chromosome: 13
Exon count:
15
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 13 NC_044393.1 (18155944..18164511, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 13 NC_019828.1 (18845683..18856620, complement)

Chromosome 13 - NC_044393.1Genomic Context describing neighboring genes Neighboring gene ferritin light chain-like Neighboring gene zinc finger protein 335 Neighboring gene phosphorylated CTD interacting factor 1 Neighboring gene phospholipid transfer protein Neighboring gene neuralized E3 ubiquitin protein ligase 2 Neighboring gene spermatogenesis associated 25 Neighboring gene zinc finger SWIM-type containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type carboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysosomal protective protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044393.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    18155944..18164511 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003253661.4 → XP_003253709.2  lysosomal protective protein

    UniProtKB/TrEMBL
    G1R517
    Related
    ENSNLEP00000050341.1, ENSNLET00000060670.1
    Conserved Domains (1) summary
    pfam00450
    Location:53 → 490
    Peptidase_S10; Serine carboxypeptidase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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