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SULF1 sulfatase 1 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100583432, updated on 8-Mar-2024

Summary

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Gene symbol
SULF1
Gene description
sulfatase 1
See related
EnsemblRapid:ENSNLEG00000011274
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See SULF1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
22
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 16 NC_044396.1 (2393227..2555741, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 16 NC_019831.1 (2532638..2691239, complement)

Chromosome 16 - NC_044396.1Genomic Context describing neighboring genes Neighboring gene syntenin-1-like Neighboring gene thioredoxin-related transmembrane protein 1 pseudogene Neighboring gene solute carrier organic anion transporter family member 5A1 Neighboring gene tropomyosin alpha-4 chain-like Neighboring gene U7 small nuclear RNA Neighboring gene chromosome 16 C8orf34 homolog Neighboring gene transfer RNA glutamic acid (anticodon UUC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine-6-sulfatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycosaminoglycan binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
extracellular sulfatase Sulf-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044396.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    2393227..2555741 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030795160.1 → XP_030651020.1  extracellular sulfatase Sulf-1

    UniProtKB/TrEMBL
    A0A2I3GQX0
    Related
    ENSNLEP00000033743.2, ENSNLET00000036105.2
    Conserved Domains (3) summary
    cd16147
    Location:42 → 384
    G6S; glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)
    pfam12548
    Location:534 → 678
    DUF3740; Sulfatase protein
    cl23718
    Location:766 → 815
    ALP_like; alkaline phosphatases and sulfatases
Nucleotide Protein
Heading Accession and Version

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