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LYPD5 LY6/PLAUR domain containing 5 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100582813, updated on 8-Mar-2024

Summary

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Gene symbol
LYPD5
Gene description
LY6/PLAUR domain containing 5
See related
EnsemblRapid:ENSNLEG00000001775
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See LYPD5 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
4
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 17 NC_044397.1 (87004604..87008393, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 17 NC_019832.1 (90205993..90232484, complement)

Chromosome 17 - NC_044397.1Genomic Context describing neighboring genes Neighboring gene SMG9 nonsense mediated mRNA decay factor Neighboring gene potassium calcium-activated channel subfamily N member 4 Neighboring gene zinc finger protein 283 Neighboring gene zinc finger protein 404 Neighboring gene zinc finger protein 45

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ly6/PLAUR domain-containing protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044397.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    87004604..87008393 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030796837.1 → XP_030652697.1  ly6/PLAUR domain-containing protein 5

    UniProtKB/TrEMBL
    G1QMH3
    Related
    ENSNLEP00000002139.2, ENSNLET00000002255.3
    Conserved Domains (1) summary
    pfam00021
    Location:92 → 171
    UPAR_LY6; u-PAR/Ly-6 domain
Nucleotide Protein
Heading Accession and Version

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