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CHODL chondrolectin [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100582030, updated on 8-Mar-2024

Summary

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Gene symbol
CHODL
Gene description
chondrolectin
See related
EnsemblRapid:ENSNLEG00000002220
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See CHODL in Genome Data Viewer
Location:
chromosome: 25
Exon count:
7
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 25 NC_044405.1 (4415273..4441181)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 25 NC_019840.1 (5468075..5495072)

Chromosome 25 - NC_044405.1Genomic Context describing neighboring genes Neighboring gene chromosome 25 C21orf91 homolog Neighboring gene 60S ribosomal protein L37 pseudogene Neighboring gene transmembrane serine protease 15 Neighboring gene uncharacterized LOC115833166

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondrolectin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044405.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    4415273..4441181
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003263792.3 → XP_003263840.2  chondrolectin isoform X1

    UniProtKB/TrEMBL
    G1QP30
    Related
    ENSNLEP00000045483.2, ENSNLET00000042891.2
    Conserved Domains (1) summary
    cl02432
    Location:28 → 180
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

  2. XM_003263793.3 → XP_003263841.2  chondrolectin isoform X2

    UniProtKB/TrEMBL
    A0A2I3HPD7
    Related
    ENSNLEP00000029868.2, ENSNLET00000054718.2
    Conserved Domains (1) summary
    cl02432
    Location:9 → 161
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

  3. XM_030806163.1 → XP_030662023.1  chondrolectin isoform X3

    UniProtKB/TrEMBL
    A0A2I3GF14
    Conserved Domains (1) summary
    cl02432
    Location:1 → 139
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
Heading Accession and Version

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