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CNTFR ciliary neurotrophic factor receptor [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100581920, updated on 8-Mar-2024

Summary

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Gene symbol
CNTFR
Gene description
ciliary neurotrophic factor receptor
See related
EnsemblRapid:ENSNLEG00000004878
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See CNTFR in Genome Data Viewer
Location:
chromosome: 8
Exon count:
14
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 8 NC_044388.1 (80505266..80543444)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 8 NC_019823.1 (83276688..83319108)

Chromosome 8 - NC_044388.1Genomic Context describing neighboring genes Neighboring gene dynactin subunit 3 Neighboring gene ribonuclease P/MRP subunit p25 like Neighboring gene dynein axonemal intermediate chain 1 Neighboring gene energy homeostasis associated

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ciliary neurotrophic factor receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytokine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytokine-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CNTFR-CLCF1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ciliary neurotrophic factor receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ciliary neurotrophic factor receptor subunit alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044388.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    80505266..80543444
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030817553.1 → XP_030673413.1  ciliary neurotrophic factor receptor subunit alpha isoform X3

    UniProtKB/TrEMBL
    G1QYB4
    Conserved Domains (2) summary
    smart00408
    Location:39 → 96
    IGc2; Immunoglobulin C-2 Type
    cd00063
    Location:204 → 300
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  2. XM_030817555.1 → XP_030673415.1  ciliary neurotrophic factor receptor subunit alpha isoform X3

    UniProtKB/TrEMBL
    G1QYB4
    Related
    ENSNLEP00000005935.1, ENSNLET00000006244.3
    Conserved Domains (2) summary
    smart00408
    Location:39 → 96
    IGc2; Immunoglobulin C-2 Type
    cd00063
    Location:204 → 300
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  3. XM_004088794.2 → XP_004088842.1  ciliary neurotrophic factor receptor subunit alpha isoform X3

    See identical proteins and their annotated locations for XP_004088842.1

    UniProtKB/TrEMBL
    G1QYB4
    Conserved Domains (2) summary
    smart00408
    Location:39 → 96
    IGc2; Immunoglobulin C-2 Type
    cd00063
    Location:204 → 300
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  4. XM_030817556.1 → XP_030673416.1  ciliary neurotrophic factor receptor subunit alpha isoform X3

    UniProtKB/TrEMBL
    G1QYB4
    Conserved Domains (2) summary
    smart00408
    Location:39 → 96
    IGc2; Immunoglobulin C-2 Type
    cd00063
    Location:204 → 300
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  5. XM_003263393.3 → XP_003263441.1  ciliary neurotrophic factor receptor subunit alpha isoform X3

    See identical proteins and their annotated locations for XP_003263441.1

    UniProtKB/TrEMBL
    G1QYB4
    Conserved Domains (2) summary
    smart00408
    Location:39 → 96
    IGc2; Immunoglobulin C-2 Type
    cd00063
    Location:204 → 300
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  6. XM_003263394.2 → XP_003263442.1  ciliary neurotrophic factor receptor subunit alpha isoform X3

    See identical proteins and their annotated locations for XP_003263442.1

    UniProtKB/TrEMBL
    G1QYB4
    Conserved Domains (2) summary
    smart00408
    Location:39 → 96
    IGc2; Immunoglobulin C-2 Type
    cd00063
    Location:204 → 300
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  7. XM_030817554.1 → XP_030673414.1  ciliary neurotrophic factor receptor subunit alpha isoform X3

    UniProtKB/TrEMBL
    G1QYB4
    Conserved Domains (2) summary
    smart00408
    Location:39 → 96
    IGc2; Immunoglobulin C-2 Type
    cd00063
    Location:204 → 300
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  8. XM_030817552.1 → XP_030673412.1  ciliary neurotrophic factor receptor subunit alpha isoform X2

    Related
    ENSNLEP00000058056.1, ENSNLET00000078540.1
    Conserved Domains (2) summary
    smart00408
    Location:130 → 187
    IGc2; Immunoglobulin C-2 Type
    cd00063
    Location:295 → 391
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  9. XM_030817551.1 → XP_030673411.1  ciliary neurotrophic factor receptor subunit alpha isoform X1

    Conserved Domains (1) summary
    cd00063
    Location:193 → 289
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
Nucleotide Protein
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