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ACOD1 aconitate decarboxylase 1 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100580880, updated on 8-Mar-2024

Summary

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Gene symbol
ACOD1
Gene description
aconitate decarboxylase 1
See related
EnsemblRapid:ENSNLEG00000016240
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See ACOD1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 5 NC_044385.1 (102613578..102624821)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 5 NC_019820.1 (104366967..104372822)

Chromosome 5 - NC_044385.1Genomic Context describing neighboring genes Neighboring gene potassium channel tetramerization domain containing 12 Neighboring gene transcription factor BTF3-like Neighboring gene 60S ribosomal protein L7 pseudogene Neighboring gene ATP-dependent RNA helicase A pseudogene Neighboring gene CLN5 intracellular trafficking protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cis-aconitate decarboxylase
Names
immune-responsive gene 1 protein homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044385.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    102613578..102624821
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012506913.2 → XP_012362367.2  cis-aconitate decarboxylase

    UniProtKB/TrEMBL
    A0A2I3GS54
    Related
    ENSNLEP00000034144.2, ENSNLET00000043252.2
    Conserved Domains (1) summary
    pfam03972
    Location:8 → 441
    MmgE_PrpD; MmgE/PrpD family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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