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SLC35C1 solute carrier family 35 member C1 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100580313, updated on 8-Mar-2024

Summary

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Gene symbol
SLC35C1
Gene description
solute carrier family 35 member C1
See related
EnsemblRapid:ENSNLEG00000017984
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See SLC35C1 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
5
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 15 NC_044395.1 (105733629..105742840, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 15 NC_019830.1 (107746404..107753846, complement)

Chromosome 15 - NC_044395.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase RNF169-like Neighboring gene mitogen-activated protein kinase 8 interacting protein 1 Neighboring gene cryptochrome circadian regulator 2 Neighboring gene DNA damage-regulated autophagy modulator protein 1 pseudogene Neighboring gene LARGE xylosyl- and glucuronyltransferase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GDP-fucose import into Golgi lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose transporter 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044395.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    105733629..105742840 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030794559.1 → XP_030650419.1  GDP-fucose transporter 1 isoform X2

    UniProtKB/TrEMBL
    G1S8K8
    Related
    ENSNLEP00000021847.2, ENSNLET00000022950.4
    Conserved Domains (1) summary
    cl26744
    Location:26 → 290
    TPT; Triose-phosphate Transporter family

  2. XM_030794558.1 → XP_030650418.1  GDP-fucose transporter 1 isoform X1

    Related
    ENSNLEP00000054161.1, ENSNLET00000061688.1
    Conserved Domains (1) summary
    cl26744
    Location:39 → 303
    TPT; Triose-phosphate Transporter family

  3. XM_030794560.1 → XP_030650420.1  GDP-fucose transporter 1 isoform X2

    UniProtKB/TrEMBL
    G1S8K8
    Conserved Domains (1) summary
    cl26744
    Location:26 → 290
    TPT; Triose-phosphate Transporter family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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