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LOC100567864 DNA-directed RNA polymerases I and III subunit RPAC2 [ Anolis carolinensis (green anole) ]

Gene ID: 100567864, updated on 15-Feb-2024

Summary

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Gene symbol
LOC100567864
Gene description
DNA-directed RNA polymerases I and III subunit RPAC2
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
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Genomic context

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See LOC100567864 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) Unplaced Scaffold NW_026943823.1 (10807857..10812640)
102 previous assembly AnoCar2.0 (GCF_000090745.1) Unplaced Scaffold NW_003338749.1 (1812387..1817173)

NW_026943823.1Genomic Context describing neighboring genes Neighboring gene SLAIN motif-containing protein-like Neighboring gene vesicle associated membrane protein 7 Neighboring gene endothelin receptor type B Neighboring gene brain-specific homeobox/POU domain protein 3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase I activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase III activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of RNA polymerase III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerases I and III subunit RPAC2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NW_026943823.1 Reference rAnoCar3.1.pri

    Range
    10807857..10812640
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008114663.3 → XP_008112870.1  DNA-directed RNA polymerases I and III subunit RPAC2 isoform X2

    UniProtKB/TrEMBL
    H9GMN1
    Conserved Domains (2) summary
    cd07029
    Location:16 → 100
    RNAP_I_III_AC19; AC19 subunit of Eukaryotic RNA polymerase (RNAP) I and RNAP III
    pfam01193
    Location:27 → 58
    RNA_pol_L; RNA polymerase Rpb3/Rpb11 dimerization domain

  2. XM_062964078.1 → XP_062820148.1  DNA-directed RNA polymerases I and III subunit RPAC2 isoform X1

Nucleotide Protein
Heading Accession and Version

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