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cnot8 CCR4-NOT transcription complex subunit 8 [ Anolis carolinensis (green anole) ]

Gene ID: 100567145, updated on 11-Apr-2024

Summary

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Gene symbol
cnot8
Gene description
CCR4-NOT transcription complex subunit 8
See related
Ensembl:ENSACAG00000004001
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Orthologs
human mouse all
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Genomic context

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See cnot8 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 2 NC_085842.1 (94056750..94071870, complement)
102 previous assembly AnoCar2.0 (GCF_000090745.1) Unplaced Scaffold NW_003338752.1 (792069..807176)

Chromosome 2 - NC_085842.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L22 Neighboring gene gem nuclear organelle associated protein 5 Neighboring gene fatty acid hydroxylase domain containing 2 Neighboring gene La ribonucleoprotein 1, translational regulator

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables poly(A)-specific ribonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CCR4-NOT complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of CCR4-NOT core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CCR4-NOT transcription complex subunit 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NC_085842.1 Reference rAnoCar3.1.pri

    Range
    94056750..94071870 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003223458.4 → XP_003223506.1  CCR4-NOT transcription complex subunit 8

    See identical proteins and their annotated locations for XP_003223506.1

    UniProtKB/TrEMBL
    H9G8E3
    Related
    ENSACAP00000003923.2
    Conserved Domains (1) summary
    cl23804
    Location:1 → 263
    CAF1; CAF1 family ribonuclease

  2. XM_008114779.3 → XP_008112986.1  CCR4-NOT transcription complex subunit 8

    See identical proteins and their annotated locations for XP_008112986.1

    UniProtKB/TrEMBL
    H9G8E3
    Conserved Domains (1) summary
    cl23804
    Location:1 → 263
    CAF1; CAF1 family ribonuclease

  3. XM_008114780.3 → XP_008112987.1  CCR4-NOT transcription complex subunit 8

    See identical proteins and their annotated locations for XP_008112987.1

    UniProtKB/TrEMBL
    H9G8E3
    Conserved Domains (1) summary
    cl23804
    Location:1 → 263
    CAF1; CAF1 family ribonuclease
Nucleotide Protein
Heading Accession and Version

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