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pomt2 protein O-mannosyltransferase 2 [ Anolis carolinensis (green anole) ]

Gene ID: 100566915, updated on 8-Mar-2024

Summary

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Gene symbol
pomt2
Gene description
protein O-mannosyltransferase 2
See related
Ensembl:ENSACAG00000017170
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Orthologs
human mouse all
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Genomic context

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See pomt2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 1 NC_085841.1 (331707237..331747167, complement)
102 previous assembly AnoCar2.0 (GCF_000090745.1) 1 NC_014776.1 (20784243..20819750)

Chromosome 1 - NC_085841.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 63C Neighboring gene neuroglobin Neighboring gene kelch domain-containing protein 2 Neighboring gene glutathione S-transferase zeta 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NC_085841.1 Reference rAnoCar3.1.pri

    Range
    331707237..331747167 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008119856.3 → XP_008118063.1  protein O-mannosyl-transferase 2 isoform X2

    Conserved Domains (4) summary
    smart00472
    Location:382 → 437
    MIR; Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases
    pfam02366
    Location:90 → 284
    PMT; Dolichyl-phosphate-mannose-protein mannosyltransferase
    pfam02815
    Location:334 → 494
    MIR; MIR domain
    pfam16192
    Location:516 → 726
    PMT_4TMC; C-terminal four TMM region of protein-O-mannosyltransferase

  2. XM_003214431.4 → XP_003214479.1  protein O-mannosyl-transferase 2 isoform X1

    UniProtKB/TrEMBL
    G1KTL9
    Related
    ENSACAP00000016915.3
    Conserved Domains (4) summary
    smart00472
    Location:389 → 444
    MIR; Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases
    COG1928
    Location:46 → 735
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
    pfam02366
    Location:52 → 291
    PMT; Dolichyl-phosphate-mannose-protein mannosyltransferase
    pfam16192
    Location:523 → 733
    PMT_4TMC; C-terminal four TMM region of protein-O-mannosyltransferase
Nucleotide Protein
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