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slc11a1 solute carrier family 11 member 1 [ Anolis carolinensis (green anole) ]

Gene ID: 100566079, updated on 10-Oct-2024

Summary

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Gene symbol
slc11a1
Gene description
solute carrier family 11 member 1
See related
Ensembl:ENSACAG00000001716
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Orthologs
human mouse all
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Genomic context

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See slc11a1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 1 NC_085841.1 (241811403..241850127, complement)
102 previous assembly AnoCar2.0 (GCF_000090745.1) 1 NC_014776.1 (88642851..88681512, complement)

Chromosome 1 - NC_085841.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 37 Neighboring gene villin 1 Neighboring gene CTD small phosphatase 1 Neighboring gene microRNA mir-26-1 Neighboring gene probable hydrolase PNKD Neighboring gene ciliogenesis associated TTC17 interacting protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadmium ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables manganese ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal cation:proton antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular iron ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in metal ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to lipopolysaccharide IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in phagocytic vesicle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
natural resistance-associated macrophage protein 1
Names
solute carrier family 11 (proton-coupled divalent metal ion transporter), member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NC_085841.1 Reference rAnoCar3.1.pri

    Range
    241811403..241850127 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008110226.3 → XP_008108433.1  natural resistance-associated macrophage protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A803TML1, G1KA06
    Related
    ENSACAP00000001836.3
    Conserved Domains (2) summary
    TIGR01197
    Location:53 → 456
    nramp; NRAMP (natural resistance-associated macrophage protein) metal ion transporters
    pfam01566
    Location:75 → 462
    Nramp; Natural resistance-associated macrophage protein

  2. XM_062967321.1 → XP_062823391.1  natural resistance-associated macrophage protein 1 isoform X1

Nucleotide Protein
Heading Accession and Version

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