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rps5 ribosomal protein S5 [ Anolis carolinensis (green anole) ]

Gene ID: 100565036, updated on 8-Mar-2024

Summary

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Gene symbol
rps5
Gene description
ribosomal protein S5
See related
Ensembl:ENSACAG00000037045
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Orthologs
human mouse all
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Genomic context

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See rps5 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 2 NC_085842.1 (32094429..32101527)
102 previous assembly AnoCar2.0 (GCF_000090745.1) 2 NC_014777.1 (189655478..189662624)

Chromosome 2 - NC_085842.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134297080 Neighboring gene 1-acyl-sn-glycerol-3-phosphate acyltransferase alpha Neighboring gene tektin like 1 Neighboring gene ring finger protein 225 Neighboring gene gamma-aminobutyric acid type B receptor subunit 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables rRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ribosomal small subunit assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
small ribosomal subunit protein uS7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NC_085842.1 Reference rAnoCar3.1.pri

    Range
    32094429..32101527
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003217880.4 → XP_003217928.1  small ribosomal subunit protein uS7

    UniProtKB/TrEMBL
    A0A803TUU8
    Related
    ENSACAP00000038988.1
    Conserved Domains (1) summary
    cd14867
    Location:17 → 203
    uS7_Eukaryote; Eukaryota homolog of Ribosomal Protein S7
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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