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tor1aip2 torsin 1A interacting protein 2 [ Anolis carolinensis (green anole) ]

Gene ID: 100564583, updated on 8-Mar-2024

Summary

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Gene symbol
tor1aip2
Gene description
torsin 1A interacting protein 2
See related
Ensembl:ENSACAG00000001161
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Orthologs
human mouse all
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Genomic context

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See tor1aip2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 4 NC_085844.1 (125437469..125454223)
102 previous assembly AnoCar2.0 (GCF_000090745.1) 4 NC_014779.1 (70662293..70678785)

Chromosome 4 - NC_085844.1Genomic Context describing neighboring genes Neighboring gene centrosomal protein 350 Neighboring gene torsin 1A interacting protein 1 Neighboring gene ADAMTS-like protein 2 Neighboring gene uncharacterized LOC134298245

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2
Names
torsin A interacting protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NC_085844.1 Reference rAnoCar3.1.pri

    Range
    125437469..125454223
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008108916.3 → XP_008107123.1  torsin-1A-interacting protein 2 isoform X1

    UniProtKB/TrEMBL
    G1K935
    Related
    ENSACAP00000001045.4
    Conserved Domains (1) summary
    pfam05609
    Location:183 → 602
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  2. XM_003219836.4 → XP_003219884.2  torsin-1A-interacting protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A803T9R0
    Related
    ENSACAP00000031950.1
    Conserved Domains (1) summary
    pfam05609
    Location:183 → 562
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
Nucleotide Protein
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