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p3h2 prolyl 3-hydroxylase 2 [ Anolis carolinensis (green anole) ]

Gene ID: 100562772, updated on 8-Mar-2024

Summary

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Gene symbol
p3h2
Gene description
prolyl 3-hydroxylase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Also known as
leprel1
Orthologs
human mouse all
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Genomic context

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See p3h2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 3 NC_085843.1 (285665766..285814393, complement)
102 previous assembly AnoCar2.0 (GCF_000090745.1) Unplaced Scaffold NW_003338933.1 (125616..252109, complement)

Chromosome 3 - NC_085843.1Genomic Context describing neighboring genes Neighboring gene tumor protein p63 regulated 1 Neighboring gene tumor protein p63 Neighboring gene uncharacterized LOC134297936 Neighboring gene U2 spliceosomal RNA Neighboring gene claudin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-proline 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prolyl 3-hydroxylase 2
Names
leprecan-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NC_085843.1 Reference rAnoCar3.1.pri

    Range
    285665766..285814393 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062976937.1 → XP_062833007.1  prolyl 3-hydroxylase 2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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