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LOC100561184 mannose-binding protein [ Anolis carolinensis (green anole) ]

Gene ID: 100561184, updated on 15-Feb-2024

Summary

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Gene symbol
LOC100561184
Gene description
mannose-binding protein
See related
Ensembl:ENSACAG00000041837
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
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Genomic context

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See LOC100561184 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 3 NC_085843.1 (177087857..177112996, complement)
102 previous assembly AnoCar2.0 (GCF_000090745.1) Unplaced Scaffold NW_003338780.1 (1578135..1598957)

Chromosome 3 - NC_085843.1Genomic Context describing neighboring genes Neighboring gene pulmonary surfactant-associated protein A Neighboring gene mannose binding lectin 2 Neighboring gene pulmonary surfactant-associated protein D Neighboring gene uncharacterized LOC134297670 Neighboring gene pulmonary surfactant-associated protein D Neighboring gene pulmonary surfactant-associated protein D

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent conferring tensile strength IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannose-binding protein C; mannose-binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NC_085843.1 Reference rAnoCar3.1.pri

    Range
    177087857..177112996 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008115793.3 → XP_008114000.2  mannose-binding protein C isoform X2

  2. XM_008115791.2 → XP_008113998.2  mannose-binding protein isoform X1

  3. XM_003224085.3 → XP_003224133.2  mannose-binding protein isoform X1

Nucleotide Protein
Heading Accession and Version

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