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chst13 carbohydrate sulfotransferase 13 [ Anolis carolinensis (green anole) ]

Gene ID: 100560568, updated on 8-Mar-2024

Summary

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Gene symbol
chst13
Gene description
carbohydrate sulfotransferase 13
See related
Ensembl:ENSACAG00000040038
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Orthologs
human mouse all
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Genomic context

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See chst13 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 2 NC_085842.1 (61497910..61549431, complement)
102 previous assembly AnoCar2.0 (GCF_000090745.1) 2 NC_014777.1 (168738924..168791135)

Chromosome 2 - NC_085842.1Genomic Context describing neighboring genes Neighboring gene KLF transcription factor 15 Neighboring gene solute carrier family 41 member 3 Neighboring gene uncharacterized LOC134296019 Neighboring gene uncharacterized LOC100552577

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 13
Names
carbohydrate (chondroitin 4) sulfotransferase 13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NC_085842.1 Reference rAnoCar3.1.pri

    Range
    61497910..61549431 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003217773.3 → XP_003217821.1  carbohydrate sulfotransferase 13

    UniProtKB/TrEMBL
    A0A803SZN3
    Related
    ENSACAP00000028423.1
    Conserved Domains (1) summary
    pfam03567
    Location:101 → 331
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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