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zc3hc1 zinc finger C3HC-type containing 1 [ Anolis carolinensis (green anole) ]

Gene ID: 100558826, updated on 8-Mar-2024

Summary

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Gene symbol
zc3hc1
Gene description
zinc finger C3HC-type containing 1
See related
Ensembl:ENSACAG00000001638
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Orthologs
human mouse all
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Genomic context

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See zc3hc1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 5 NC_085845.1 (201529416..201581584)
102 previous assembly AnoCar2.0 (GCF_000090745.1) Unplaced Scaffold NW_003339255.1 (158443..194998, complement)

Chromosome 5 - NC_085845.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100559220 Neighboring gene uncharacterized LOC134299687 Neighboring gene kelch domain containing 10 Neighboring gene uncharacterized LOC103281277 Neighboring gene ubiquitin conjugating enzyme E2 H Neighboring gene nuclear respiratory factor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger C3HC-type protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NC_085845.1 Reference rAnoCar3.1.pri

    Range
    201529416..201581584
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062983360.1 → XP_062839430.1  zinc finger C3HC-type protein 1 isoform X3

  2. XM_062983361.1 → XP_062839431.1  zinc finger C3HC-type protein 1 isoform X4

  3. XM_062983357.1 → XP_062839427.1  zinc finger C3HC-type protein 1 isoform X1

  4. XM_062983356.1 → XP_062839426.1  zinc finger C3HC-type protein 1 isoform X1

  5. XM_062983355.1 → XP_062839425.1  zinc finger C3HC-type protein 1 isoform X1

  6. XM_062983359.1 → XP_062839429.1  zinc finger C3HC-type protein 1 isoform X2

Nucleotide Protein
Heading Accession and Version

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