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rbbp6 RB binding protein 6, ubiquitin ligase [ Anolis carolinensis (green anole) ]

Gene ID: 100557989, updated on 8-Mar-2024

Summary

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Gene symbol
rbbp6
Gene description
RB binding protein 6, ubiquitin ligase
See related
Ensembl:ENSACAG00000011794
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Orthologs
human mouse all
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Genomic context

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See rbbp6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) Unplaced Scaffold NW_026943824.1 (14283511..14312943)
102 previous assembly AnoCar2.0 (GCF_000090745.1) Unplaced Scaffold NW_003339430.1 (23159..45087)

NW_026943824.1Genomic Context describing neighboring genes Neighboring gene aquaporin 8 Neighboring gene protein kinase C beta type-like Neighboring gene uncharacterized LOC134294203 Neighboring gene trinucleotide repeat containing adaptor 6A Neighboring gene uncharacterized LOC134294204 Neighboring gene mucin-5AC

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RBBP6
Names
retinoblastoma binding protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NW_026943824.1 Reference rAnoCar3.1.pri

    Range
    14283511..14312943
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062964487.1 → XP_062820557.1  E3 ubiquitin-protein ligase RBBP6 isoform X1

  2. XM_062964486.1 → XP_062820556.1  E3 ubiquitin-protein ligase RBBP6 isoform X1

  3. XM_062964488.1 → XP_062820558.1  E3 ubiquitin-protein ligase RBBP6 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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