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LOC100555056 heparan sulfate glucosamine 3-O-sulfotransferase 3B1 [ Anolis carolinensis (green anole) ]

Gene ID: 100555056, updated on 14-Feb-2024

Summary

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Gene symbol
LOC100555056
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 3B1
See related
Ensembl:ENSACAG00000043435
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
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Genomic context

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See LOC100555056 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 2 NC_085842.1 (142087340..142128740)
102 previous assembly AnoCar2.0 (GCF_000090745.1) 2 NC_014777.1 (106898568..106935446, complement)

Chromosome 2 - NC_085842.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103277811 Neighboring gene protoheme IX farnesyltransferase, mitochondrial Neighboring gene uncharacterized LOC134296270 Neighboring gene peripheral myelin protein 22 Neighboring gene tektin 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 3B1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NC_085842.1 Reference rAnoCar3.1.pri

    Range
    142087340..142128740
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003217164.4 → XP_003217212.1  heparan sulfate glucosamine 3-O-sulfotransferase 3B1

    UniProtKB/TrEMBL
    A0A803T209
    Related
    ENSACAP00000029249.1
    Conserved Domains (1) summary
    pfam00685
    Location:127 → 368
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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