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galnt1 polypeptide N-acetylgalactosaminyltransferase 1 [ Anolis carolinensis (green anole) ]

Gene ID: 100553448, updated on 8-Mar-2024

Summary

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Gene symbol
galnt1
Gene description
polypeptide N-acetylgalactosaminyltransferase 1
See related
Ensembl:ENSACAG00000006843
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Orthologs
human mouse all
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Genomic context

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See galnt1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 6 NC_085846.1 (46348356..46403458, complement)
102 previous assembly AnoCar2.0 (GCF_000090745.1) 6 NC_014781.1 (57555600..57611449)

Chromosome 6 - NC_085846.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134299957 Neighboring gene uncharacterized LOC134299958 Neighboring gene microRNA mir-187 Neighboring gene transmembrane protein 245 Neighboring gene microRNA mir-32 Neighboring gene ferric chelate reductase 1 like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polypeptide N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 1
Names
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NC_085846.1 Reference rAnoCar3.1.pri

    Range
    46348356..46403458 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003222244.4 → XP_003222292.1  polypeptide N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    A0A803TKI1, G1KFW2
    Related
    ENSACAP00000006759.3
    Conserved Domains (3) summary
    cd02510
    Location:119 → 419
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:432 → 550
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:432 → 548
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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