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tmed2 transmembrane p24 trafficking protein 2 [ Anolis carolinensis (green anole) ]

Gene ID: 100553065, updated on 8-Mar-2024

Summary

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Gene symbol
tmed2
Gene description
transmembrane p24 trafficking protein 2
See related
Ensembl:ENSACAG00000036452
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Orthologs
human mouse all
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Genomic context

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See tmed2 in Genome Data Viewer
Location:
chromosome: X
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) X NC_085847.1 (9283890..9292074)
102 previous assembly AnoCar2.0 (GCF_000090745.1) Linkage Group b NC_014783.1 (1769679..1777902, complement)

Chromosome X - NC_085847.1Genomic Context describing neighboring genes Neighboring gene small nuclear ribonucleoprotein U11/U12 subunit 35 Neighboring gene Rab interacting lysosomal protein like 1 Neighboring gene DEAD-box helicase 55 Neighboring gene eukaryotic translation initiation factor 2B subunit alpha

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane emp24 domain-containing protein 2
Names
transmembrane emp24 domain trafficking protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NC_085847.1 Reference rAnoCar3.1.pri

    Range
    9283890..9292074
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008113686.3 → XP_008111893.2  transmembrane emp24 domain-containing protein 2 isoform X1

  2. XM_003222738.3 → XP_003222786.3  transmembrane emp24 domain-containing protein 2 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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