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edc3 enhancer of mRNA decapping 3 [ Anolis carolinensis (green anole) ]

Gene ID: 100551645, updated on 8-Mar-2024

Summary

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Gene symbol
edc3
Gene description
enhancer of mRNA decapping 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Orthologs
human mouse all
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Genomic context

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See edc3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) Unplaced Scaffold NW_026943822.1 (21007551..21025892)
102 previous assembly AnoCar2.0 (GCF_000090745.1) Unplaced Scaffold NW_003341323.1 (841..12258, complement)

NW_026943822.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 1A5 Neighboring gene cytochrome P450 1A5 Neighboring gene CDC like kinase 3 Neighboring gene myosin heavy chain, clone 203

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in P-body assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in deadenylation-independent decapping of nuclear-transcribed mRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
enhancer of mRNA-decapping protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NW_026943822.1 Reference rAnoCar3.1.pri

    Range
    21007551..21025892
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062963251.1 → XP_062819321.1  enhancer of mRNA-decapping protein 3 isoform X1

  2. XM_062963252.1 → XP_062819322.1  enhancer of mRNA-decapping protein 3 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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