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LOC100551532 large ribosomal subunit protein uL2 [ Anolis carolinensis (green anole) ]

Gene ID: 100551532, updated on 3-Apr-2024

Summary

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Gene symbol
LOC100551532
Gene description
large ribosomal subunit protein uL2
See related
Ensembl:ENSACAG00000017933
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Also known as
rpl8
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Genomic context

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See LOC100551532 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 3 NC_085843.1 (85144058..85150797)
102 previous assembly AnoCar2.0 (GCF_000090745.1) 3 NC_014778.1 (134050786..134057399, complement)

Chromosome 3 - NC_085843.1Genomic Context describing neighboring genes Neighboring gene nyctalopin Neighboring gene DEAD-box helicase 3 X-linked Neighboring gene ubiquitin specific peptidase 9 X-linked Neighboring gene mediator complex subunit 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
large ribosomal subunit protein uL2
Names
60S ribosomal protein L8
ribosomal protein L8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NC_085843.1 Reference rAnoCar3.1.pri

    Range
    85144058..85150797
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003218958.4 → XP_003219006.3  large ribosomal subunit protein uL2

    UniProtKB/TrEMBL
    G1KUJ6
    Related
    ENSACAP00000017660.2
    Conserved Domains (1) summary
    PTZ00180
    Location:1 → 254
    PTZ00180; 60S ribosomal protein L8; Provisional
Nucleotide Protein
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