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UBXN2B UBX domain protein 2B [ Meleagris gallopavo (turkey) ]

Gene ID: 100551455, updated on 8-Mar-2024

Summary

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Gene symbol
UBXN2B
Gene description
UBX domain protein 2B
See related
Ensembl:ENSMGAG00000011031
Gene type
protein coding
RefSeq status
MODEL
Organism
Meleagris gallopavo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
Orthologs
human mouse all
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Genomic context

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See UBXN2B in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
103 current Turkey_5.1 (GCF_000146605.3) 3 NC_015013.2 (57098478..57114988)
Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 3 NC_015013.1 (61905016..61976887)

Chromosome 3 - NC_015013.2Genomic Context describing neighboring genes Neighboring gene 3'(2'), 5'-bisphosphate nucleotidase 2 Neighboring gene family with sequence similarity 110 member B Neighboring gene cytochrome P450 7A1 Neighboring gene syndecan binding protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear membrane reassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UBX domain-containing protein 2B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Turkey_5.1 Primary Assembly

Genomic

  1. NC_015013.2 Reference Turkey_5.1 Primary Assembly

    Range
    57098478..57114988
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019614049.2 → XP_019469594.2  UBX domain-containing protein 2B isoform X2

    UniProtKB/TrEMBL
    G1NEW2
    Related
    ENSMGAP00000011506.2, ENSMGAT00000012383.2
    Conserved Domains (2) summary
    smart00553
    Location:249 → 341
    SEP; Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47
    cl28922
    Location:359 → 397
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

  2. XM_010708960.3 → XP_010707262.2  UBX domain-containing protein 2B isoform X1

    UniProtKB/TrEMBL
    G1NEW2
    Related
    ENSMGAP00000024212.1, ENSMGAT00000032350.1
    Conserved Domains (2) summary
    smart00553
    Location:249 → 341
    SEP; Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47
    cd17161
    Location:359 → 440
    UBX_UBXN2B; Ubiquitin regulatory domain X (UBX) found in UBX domain protein 2B (UBXN2B) and similar proteins
Nucleotide Protein
Heading Accession and Version

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