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RPN1 ribophorin I [ Meleagris gallopavo (turkey) ]

Gene ID: 100551171, updated on 8-Mar-2024

Summary

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Gene symbol
RPN1
Gene description
ribophorin I
See related
Ensembl:ENSMGAG00000007231
Gene type
protein coding
RefSeq status
MODEL
Organism
Meleagris gallopavo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See RPN1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
9
Annotation release Status Assembly Chr Location
103 current Turkey_5.1 (GCF_000146605.3) 14 NC_015024.2 (8788161..8794865)
Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 14 NC_015024.1 (9567449..9575014)

Chromosome 14 - NC_015024.2Genomic Context describing neighboring genes Neighboring gene histone H2A type 2-B Neighboring gene RAB7A, member RAS oncogene family Neighboring gene uncharacterized LOC109369887 Neighboring gene GATA binding protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of oligosaccharyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Turkey_5.1 Primary Assembly

Genomic

  1. NC_015024.2 Reference Turkey_5.1 Primary Assembly

    Range
    8788161..8794865
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010718645.1 → XP_010716947.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1

    UniProtKB/TrEMBL
    G1N5S5
    Related
    ENSMGAP00000007331.2, ENSMGAT00000008103.2
    Conserved Domains (1) summary
    pfam04597
    Location:23 → 383
    Ribophorin_I; Ribophorin I
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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