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SGPP2 sphingosine-1-phosphate phosphatase 2 [ Meleagris gallopavo (turkey) ]

Gene ID: 100550401, updated on 8-Mar-2024

Summary

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Gene symbol
SGPP2
Gene description
sphingosine-1-phosphate phosphatase 2
See related
Ensembl:ENSMGAG00000004653
Gene type
protein coding
RefSeq status
MODEL
Organism
Meleagris gallopavo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
Orthologs
human mouse all
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Genomic context

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See SGPP2 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
5
Annotation release Status Assembly Chr Location
103 current Turkey_5.1 (GCF_000146605.3) 11 NC_015021.2 (6211173..6226253)
Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 11 NC_015021.1 (7588123..7630570)

Chromosome 11 - NC_015021.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104912576 Neighboring gene monoacylglycerol O-acyltransferase 1 Neighboring gene phenylalanyl-tRNA synthetase subunit beta Neighboring gene paired box protein Pax-3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingosine-1-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingosine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingosine-1-phosphate phosphatase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Turkey_5.1 Primary Assembly

Genomic

  1. NC_015021.2 Reference Turkey_5.1 Primary Assembly

    Range
    6211173..6226253
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019618965.2 → XP_019474510.1  sphingosine-1-phosphate phosphatase 2 isoform X2

    UniProtKB/TrEMBL
    A0A803XT59
    Related
    ENSMGAP00000022705.1, ENSMGAT00000033151.1
    Conserved Domains (1) summary
    cd03388
    Location:1 → 113
    PAP2_SPPase1; PAP2_like proteins, sphingosine-1-phosphatase subfamily. Sphingosine-1-phosphatase is an intracellular enzyme located in the endoplasmic reticulum, which regulates the level of sphingosine-1-phosphate (S1P), a bioactive lipid. S1P acts as a second ...

  2. XM_010716450.2 → XP_010714752.1  sphingosine-1-phosphate phosphatase 2 isoform X1

    UniProtKB/TrEMBL
    A0A803XT59
    Conserved Domains (1) summary
    cd03388
    Location:5 → 115
    PAP2_SPPase1; PAP2_like proteins, sphingosine-1-phosphatase subfamily. Sphingosine-1-phosphatase is an intracellular enzyme located in the endoplasmic reticulum, which regulates the level of sphingosine-1-phosphate (S1P), a bioactive lipid. S1P acts as a second ...
Nucleotide Protein
Heading Accession and Version

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