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CHST1 carbohydrate sulfotransferase 1 [ Meleagris gallopavo (turkey) ]

Gene ID: 100550392, updated on 8-Mar-2024

Summary

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Gene symbol
CHST1
Gene description
carbohydrate sulfotransferase 1
See related
Ensembl:ENSMGAG00000015808
Gene type
protein coding
RefSeq status
MODEL
Organism
Meleagris gallopavo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
Orthologs
human mouse all
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Genomic context

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See CHST1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Annotation release Status Assembly Chr Location
103 current Turkey_5.1 (GCF_000146605.3) 5 NC_015015.2 (21810265..21812831)
Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 5 NC_015015.1 (24701939..24703807)

Chromosome 5 - NC_015015.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109367741 Neighboring gene uncharacterized LOC109367740 Neighboring gene transmembrane protein 263 pseudogene Neighboring gene solute carrier family 35 member C1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables keratan sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in keratan sulfate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Turkey_5.1 Primary Assembly

Genomic

  1. NC_015015.2 Reference Turkey_5.1 Primary Assembly

    Range
    21810265..21812831
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003206426.4 → XP_003206474.1  carbohydrate sulfotransferase 1

    UniProtKB/TrEMBL
    G1NRP4
    Related
    ENSMGAP00000016750.1, ENSMGAT00000017724.2
    Conserved Domains (1) summary
    pfam00685
    Location:67 → 391
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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