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TRA2A transformer 2 alpha homolog [ Meleagris gallopavo (turkey) ]

Gene ID: 100549980, updated on 8-Mar-2024

Summary

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Gene symbol
TRA2A
Gene description
transformer 2 alpha homolog
See related
Ensembl:ENSMGAG00000010514
Gene type
protein coding
RefSeq status
MODEL
Organism
Meleagris gallopavo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
Orthologs
human mouse all
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Genomic context

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See TRA2A in Genome Data Viewer
Location:
chromosome: 6
Exon count:
9
Annotation release Status Assembly Chr Location
103 current Turkey_5.1 (GCF_000146605.3) 6 NC_015016.2 (30210433..30233339, complement)
Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 6 NC_015016.1 (31678225..31694380, complement)

Chromosome 6 - NC_015016.2Genomic Context describing neighboring genes Neighboring gene mitochondrial assembly of ribosomal large subunit 1 Neighboring gene insulin like growth factor 2 mRNA binding protein 3 Neighboring gene coiled-coil domain containing 126 Neighboring gene family with sequence similarity 221 member A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transformer-2 protein homolog alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Turkey_5.1 Primary Assembly

Genomic

  1. NC_015016.2 Reference Turkey_5.1 Primary Assembly

    Range
    30210433..30233339 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010712769.3 → XP_010711071.1  transformer-2 protein homolog alpha

    See identical proteins and their annotated locations for XP_010711071.1

    Related
    ENSMGAP00000018972.2, ENSMGAT00000018786.2
    Conserved Domains (1) summary
    cd12363
    Location:113 → 190
    RRM_TRA2; RNA recognition motif in transformer-2 protein homolog TRA2-alpha, TRA2-beta and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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