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NDST1 N-deacetylase and N-sulfotransferase 1 [ Meleagris gallopavo (turkey) ]

Gene ID: 100548970, updated on 8-Mar-2024

Summary

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Gene symbol
NDST1
Gene description
N-deacetylase and N-sulfotransferase 1
See related
Ensembl:ENSMGAG00000006555
Gene type
protein coding
RefSeq status
MODEL
Organism
Meleagris gallopavo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
Orthologs
human mouse all
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Genomic context

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See NDST1 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
15
Annotation release Status Assembly Chr Location
103 current Turkey_5.1 (GCF_000146605.3) 15 NC_015025.2 (13345408..13355374, complement)
Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 15 NC_015025.1 (12693066..12701124, complement)

Chromosome 15 - NC_015025.2Genomic Context describing neighboring genes Neighboring gene CD74 molecule Neighboring gene treacle ribosome biogenesis factor 1 Neighboring gene RNA binding motif protein 22 Neighboring gene myozenin 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1
Names
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Turkey_5.1 Primary Assembly

Genomic

  1. NC_015025.2 Reference Turkey_5.1 Primary Assembly

    Range
    13345408..13355374 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010719145.1 → XP_010717447.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1

    UniProtKB/TrEMBL
    G1N466
    Related
    ENSMGAP00000006588.3, ENSMGAT00000007342.3
    Conserved Domains (2) summary
    pfam00685
    Location:600 → 850
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:30 → 510
    HSNSD; heparan sulfate-N-deacetylase
Nucleotide Protein
Heading Accession and Version

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