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ACOD1 aconitate decarboxylase 1 [ Meleagris gallopavo (turkey) ]

Gene ID: 100548788, updated on 8-Mar-2024

Summary

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Gene symbol
ACOD1
Gene description
aconitate decarboxylase 1
See related
Ensembl:ENSMGAG00000014936
Gene type
protein coding
RefSeq status
MODEL
Organism
Meleagris gallopavo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
Orthologs
human mouse all
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Genomic context

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See ACOD1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
103 current Turkey_5.1 (GCF_000146605.3) 1 NC_015011.2 (150060965..150066594, complement)
Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 1 NC_015011.1 (160243239..160248536)

Chromosome 1 - NC_015011.2Genomic Context describing neighboring genes Neighboring gene CLN5 intracellular trafficking protein Neighboring gene glutamine amidotransferase-like class 1 domain-containing protein 3A, mitochondrial Neighboring gene feather keratin 1 Neighboring gene carbonic anhydrase 9-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cis-aconitate decarboxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Turkey_5.1 Primary Assembly

Genomic

  1. NC_015011.2 Reference Turkey_5.1 Primary Assembly

    Range
    150060965..150066594 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003203275.4 → XP_003203323.1  cis-aconitate decarboxylase

    UniProtKB/TrEMBL
    G1NPY9
    Related
    ENSMGAP00000015831.1, ENSMGAT00000016794.2
    Conserved Domains (1) summary
    pfam03972
    Location:10 → 441
    MmgE_PrpD; MmgE/PrpD family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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