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BARX2 BARX homeobox 2 [ Meleagris gallopavo (turkey) ]

Gene ID: 100546581, updated on 8-Mar-2024

Summary

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Gene symbol
BARX2
Gene description
BARX homeobox 2
See related
Ensembl:ENSMGAG00000001019
Gene type
protein coding
RefSeq status
MODEL
Organism
Meleagris gallopavo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See BARX2 in Genome Data Viewer
Location:
chromosome: 26
Exon count:
4
Annotation release Status Assembly Chr Location
103 current Turkey_5.1 (GCF_000146605.3) 26 NC_015036.2 (1389805..1417401)
Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 26 NC_015036.1 (1404544..1432602)

Chromosome 26 - NC_015036.2Genomic Context describing neighboring genes Neighboring gene potassium inwardly rectifying channel subfamily J member 5 Neighboring gene potassium inwardly rectifying channel subfamily J member 1 Neighboring gene Rho GTPase activating protein 32 Neighboring gene transmembrane protein 45B Neighboring gene transmembrane protein 45B-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein BarH-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Turkey_5.1 Primary Assembly

Genomic

  1. NC_015036.2 Reference Turkey_5.1 Primary Assembly

    Range
    1389805..1417401
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003212671.4 → XP_003212719.3  homeobox protein BarH-like 2

    UniProtKB/TrEMBL
    G1MQP7
    Related
    ENSMGAP00000000412.2, ENSMGAT00000001049.2
    Conserved Domains (1) summary
    pfam00046
    Location:120 → 174
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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