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GALNT1 polypeptide N-acetylgalactosaminyltransferase 1 [ Meleagris gallopavo (turkey) ]

Gene ID: 100544386, updated on 8-Mar-2024

Summary

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Gene symbol
GALNT1
Gene description
polypeptide N-acetylgalactosaminyltransferase 1
See related
Ensembl:ENSMGAG00000006639
Gene type
protein coding
RefSeq status
MODEL
Organism
Meleagris gallopavo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
Orthologs
human mouse all
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Genomic context

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See GALNT1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Turkey_5.1 (GCF_000146605.3) 3 NC_015013.2 (29912058..29968686, complement)
Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 3 NC_015013.1 (32968804..33030818, complement)

Chromosome 3 - NC_015013.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104910183 Neighboring gene uncharacterized LOC116216447 Neighboring gene INO80 complex subunit C Neighboring gene uncharacterized LOC109366679

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 1
Names
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Turkey_5.1 Primary Assembly

Genomic

  1. NC_015013.2 Reference Turkey_5.1 Primary Assembly

    Range
    29912058..29968686 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010708584.3 → XP_010706886.1  polypeptide N-acetylgalactosaminyltransferase 1

    See identical proteins and their annotated locations for XP_010706886.1

    UniProtKB/TrEMBL
    G1N4F1
    Related
    ENSMGAP00000006703.2, ENSMGAT00000007459.3
    Conserved Domains (2) summary
    cd02510
    Location:119 → 419
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:432 → 548
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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