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B2M beta-2-microglobulin [ Meleagris gallopavo (turkey) ]

Gene ID: 100539873, updated on 8-Mar-2024

Summary

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Gene symbol
B2M
Gene description
beta-2-microglobulin
Gene type
protein coding
RefSeq status
MODEL
Organism
Meleagris gallopavo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See B2M in Genome Data Viewer
Location:
chromosome: 12
Exon count:
3
Annotation release Status Assembly Chr Location
103 current Turkey_5.1 (GCF_000146605.3) 12 NC_015022.2 (538281..540375)
Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 12 NC_015022.1 (615477..615864)

Chromosome 12 - NC_015022.2Genomic Context describing neighboring genes Neighboring gene sorting nexin 1 Neighboring gene PAT1 homolog 2 Neighboring gene telomere repeat binding bouquet formation protein 2 Neighboring gene small nucleolar RNA SNORA71 Neighboring gene ribosomal protein S17

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables MHC class II protein complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in antigen processing and presentation of exogenous peptide antigen via MHC class II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immunoglobulin production involved in immunoglobulin-mediated immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptide antigen assembly with MHC class II protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of T cell activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of MHC class I protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of MHC class II protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-2-microglobulin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Turkey_5.1 Primary Assembly

Genomic

  1. NC_015022.2 Reference Turkey_5.1 Primary Assembly

    Range
    538281..540375
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010717227.2 → XP_010715529.2  beta-2-microglobulin

    UniProtKB/Swiss-Prot
    P21612
    Conserved Domains (1) summary
    cd05770
    Location:9 → 101
    IgC_beta2m; Class I major histocompatibility complex (MHC) beta2-microglobulin
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P21612.1 GenPept UniProtKB/Swiss-Prot:P21612

Gene LinkOut

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